Query sequence: gi|34540159|ref|NP_904638.1| Accession: [none] Description: hypothetical protein PG0323 [Porphyromonas gingivalis W83] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cupin_2 Cupin domain 33.0 1.8e-09 1 AraC_binding AraC-like ligand binding domain 17.6 0.00018 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- AraC_binding 1/1 35 96 .. 1 63 [. 17.6 0.00018 Cupin_2 1/1 39 106 .. 1 74 [] 33.0 1.8e-09 Alignments of top-scoring domains: AraC_binding: domain 1 of 1, from 35 to 96: score 17.6, E = 0.00018 *->npglegiearypghsfppHvHdfyvigyvlkGvgrfrlngrtyllgp + +++++ + +g++ ++H+ +f ++++l+G+ +r++g++ ll++ gi|3454015 35 VGNITLFSFD-QGQGLSEHTAPFDAFVQILEGEAEIRIGGQPLLLKA 80 GdllLlpPgepHdgea<-* G +++p+++ H +a gi|3454015 81 GRSVIMPANVSHALHA 96 Cupin_2: domain 1 of 1, from 39 to 106: score 33.0, E = 1.8e-09 *->glvtlpPGgssppHrHpgedEffyVLeGeleltvdGefevvlkaGDs l+ ++ G++ +H+ p +f+ +LeGe+e+ ++G+ + lkaG s gi|3454015 39 TLFSFDQGQGLSEHTAPFD-AFVQILEGEAEIRIGGQ-PLLLKAGRS 83 vyfpagvpHrfrNtgdeeparldlvvy<-* v+ pa+v H++++t +++ l + gi|3454015 84 VIMPANVSHALHATK---RFKM-LLTM 106