Query sequence: gi|34540013|ref|NP_904492.1|
Accession:      [none]
Description:    conserved hypothetical protein TIGR01125 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
UPF0004     Uncharacterized protein family UPF0004       94.1    3.7e-29   1
Radical_SAM Radical SAM superfamily                      87.1    5.4e-24   1
Band_41     FERM domain (Band 4.1 family)                 8.4      0.014   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
UPF0004       1/1       5   106 ..     1   109 []    94.1  3.7e-29
Radical_SAM   1/1     140   312 ..     1   165 []    87.1  5.4e-24
Band_41       1/1     188   200 ..   198   210 .]     8.4    0.014

Alignments of top-scoring domains:
UPF0004: domain 1 of 1, from 5 to 106: score 94.1, E = 3.7e-29
                   *->KvyieTyGCqmNlyDSEimaglLkkaGyeltsDvenpeeA.DviiiN
                      +v ++T+GC +Nl+DSE++  ++ ++Gy++  D+  +  +++++++N
  gi|3454001     5    RVDVITLGCSKNLVDSEVLMRQFLSNGYTVHHDP--ASVCgEIVVVN 49   

                   TCaVrekAeqkvrsrlgelkklkkkaaknPdgakii...VtGClAqreke
                   TC+++ +A++++ +++ e+ ++kk       +++i++  V+GCl++r   
  gi|3454001    50 TCGFIGDAQEESVNTILEMVEAKK-------AGRIGslyVMGCLSERF-- 90   

                   epellekipeVDivlG<-*
                   +++l+++ipeVD+ +G   
  gi|3454001    91 REDLKKEIPEVDAYYG    106  

Radical_SAM: domain 1 of 1, from 140 to 312: score 87.1, E = 5.4e-24
                RF    xxxxxxxxxxxxx xxxxx   xx xxxxxxxxxxxxxxxxxxxxxx
                   *->iiitrgCnlrkrC.yCafp...gk.relspeeileeakelkarlGve
                      + i++gC++   C+yCa+p  +g++r++++e+++ee++ l +++G++
  gi|3454001   140    LKISEGCDRS--CsYCAIPiitGRhRSRPMEDLVEEVRML-VKHGTR 183  

                RF  xxxxxxxxxxxxxxxxxxxxxxxx           xxxxxxxxxxxxxx
                   .viltGGePlllpdlvellerllkl...........giritletngtlld
                   ++ l   + + +    + + rl++l  + ++ ++ +++r+++  +   + 
  gi|3454001   184 eFQLIAQDLTFYGLDLYGANRLAELtarlsdikgveWLRLHYAYPAQFP- 232  

                RF xxxxxxxxxxxxxxxxx  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   pivrldeelleeLkeag..ldrvsislqsgddekvlkiinrkhtfeevle
                          +ll  ++e ++ ++++ + lq+++d   l +++r++t  e+ e
  gi|3454001   233 ------LDLLPVMRERPnvCKYLDMALQHISDP-MLGRMRRRITKAETYE 275  

                RF xxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxx   
                   aiellreaGipvv.ivvdnivglpGendedleellell<-*
                    ie++r   +p++++ +++++g+pGe++ d+eell+++   
  gi|3454001   276 LIERIRTE-VPGIhLRTTLMTGHPGETERDFEELLQFV    312  

Band_41: domain 1 of 1, from 188 to 200: score 8.4, E = 0.014
                   *->iArdLemYGVdff<-*
                      iA+dL +YG d++   
  gi|3454001   188    IAQDLTFYGLDLY    200