Query sequence: gi|24380054|ref|NP_722009.1| Accession: [none] Description: hypothetical protein SMU.1676c [Streptococcus mutans UA159] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Polysacc_synt Polysaccharide biosynthesis protein 66.9 3.4e-18 1 STT3 Oligosaccharyl transferase STT3 subunit 6.7 0.041 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Polysacc_synt 1/1 7 264 .. 1 244 [. 66.9 3.4e-18 STT3 1/1 336 363 .. 1 28 [. 6.7 0.041 Alignments of top-scoring domains: Polysacc_synt: domain 1 of 1, from 7 to 264: score 66.9, E = 3.4e-18 *->llkNvlvlllaqlisallpfvtlpy.laRvLg..pegfGlysfalai +++++++l+ +++is+ll+ v++++ +a++ e l+++ + i gi|2438005 7 MVRGTAWLTAGNFISRLLGAVYIIPwYAWMGKyaAEANALFGMGYEI 53 vglfviladlGlnaalvReiarsrddgrdl.rkeksskyisnvlllklll + lf ++++ G+++a+ +++++++ l+++ ks+ + +l +l l gi|2438005 54 YALFLLISTVGIPVAVAKQVSKYNT----LgDPKKSTYLVRKILHFMLGL 99 slifllilliaapv...allglpdlavillillllillllpgvslffswl ++if++i++ pv ++ g dl+++l+ l l++l ++ +++++++ gi|2438005 100 GAIFAVIMYMGSPVfasMSRGGQDLVPVLRSLTLAVL--VFPSMSVLRGF 147 fqglekmkyitisniieklssli....lvfiavflgsdgnllaavlilvi fqg++ +k+ +is+i e+++++i + f++ +++s + ++ av + ++ gi|2438005 148 FQGFNNLKPYAISQIAEQVVRVIwmllTAFFIMKMSSGD-YVDAVTQSTF 196 asliggiialavlrkkfkKrk...........irfvkfs.lklfkellrf a+ +g+++++avl ++ ++++ + ++++ +v ++++ l e++++ gi|2438005 197 AAFVGMFAGIAVLIYFL--WEndlldalfgkkPEKVDIDtKDLLIETVKE 244 swplflsslaislyttidtv<-* ++p+ ++ ai ++ id++ gi|2438005 245 AIPFIVTGSAIQVFKLIDQF 264 STT3: domain 1 of 1, from 336 to 363: score 6.7, E = 0.041 *->llkvvifaliagvaifsralFtdtrgls<-* +l+++i+ i+g+ i +++l+t+++gl+ gi|2438005 336 MLMIFIIPAIIGAVILAKPLYTIFYGLP 363