Query sequence: gi|24379830|ref|NP_721785.1|
Accession:      [none]
Description:    hypothetical protein SMU.1427c [Streptococcus mutans UA159]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
YbbR     YbbR-like protein                              148.1      2e-41   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
YbbR       1/3      52   135 ..     1    91 []    61.3  3.6e-16
YbbR       2/3     143   228 ..     1    91 []    50.7    3e-13
YbbR       3/3     237   313 ..     1    91 []    36.1    3e-09

Alignments of top-scoring domains:
YbbR: domain 1 of 3, from 52 to 135: score 61.3, E = 3.6e-16
                   *->vpvevkykgvlnikpgyvvskippspvkVtvt.Gpesvlesivmnrk
                      vp+++ky++++     y++s+++    +V +t+ ++  l+s ++n++
  gi|2437983    52    VPIDIKYDSNK-----YFISGYSY-DTEVYLTsTNRVKLDSEINNDT 92   

                   skvtapvDlsglkegvgsyvvpvavdglpngleveiePsrvtvti<-*
                   +++++++Dls++  ++g+++vp+++++lp g+ +e +P++++vt+   
  gi|2437983    93 RHFKVVADLSNA--KEGTNKVPLEIKDLPSGVSAEASPTTINVTV    135  

YbbR: domain 2 of 3, from 143 to 228: score 50.7, E = 3e-13
                   *->vpvevkykgvlnikpgyvvskippspvkVtvtGpesvlesivmnrks
                      ++v+ k+++++ i++gy++ ki+ s ++V+vt++es++e+i     +
  gi|2437983   143    FKVVGKVSDNQ-IADGYKLKKISTSASEVEVTSDESTIEQI-----D 183  

                   kvtapvDlsglkegvgsyvvpv.avdglpngleveiePsrvtvti<-*
                   +v+a+++ + +  +++s  v ++av+++++ l + i+P+++++ +   
  gi|2437983   184 HVVAVLPENQVLSKDYSGSVTLqAVSENGKILPSIIDPTKTDLEV    228  

YbbR: domain 3 of 3, from 237 to 313: score 36.1, E = 3e-09
                   *->vpvevkykgvlnikpgyvvskipps..pvkVtvtGpesvlesivmnr
                      vp+ v+++g      +  +s+i+ +  +++V+++G ++ le+i    
  gi|2437983   237    VPIIVELTGQI----NSSLSDIRYElaTKEVLIYGKQENLEKI---- 275  

                   kskvtapvDlsglkegvgsyvvpvavdglpngleveiePsrvtvti<-*
                    s ++a v++s+++ ++ ++++p+a d       ++i+P++vtv++   
  gi|2437983   276 -SYIKAKVNISDVT-KDTTKTIPLAADN------LKISPAKVTVKL    313